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- .gitattributes +134 -0
- arxiv/0-0/index.json +1 -0
- arxiv/0-0/tokenize_output.log +72 -0
- arxiv/0-6/index.json +1 -0
- arxiv/0-6/tokenize_output.log +58 -0
- arxiv/1-5/index.json +1 -0
- arxiv/1-5/tokenize_output.log +16 -0
- arxiv/2-9/index.json +1 -0
- arxiv/2-9/tokenize_output.log +58 -0
- arxiv/4-1-tokenized/index.json +1 -0
- arxiv/4-3/index.json +1 -0
- arxiv/4-3/tokenize_output.log +66 -0
- arxiv/4-9/tokenize_output.log +64 -0
- arxiv/5-4/index.json +1 -0
- arxiv/5-4/tokenize_output.log +0 -0
- arxiv/7-0/index.json +1 -0
- arxiv/8-7/index.json +1 -0
- openwebmath/0-1/shard.00000.mds.zstd +3 -0
- openwebmath/0-1/shard.00001.mds.zstd +3 -0
- openwebmath/0-1/shard.00002.mds.zstd +3 -0
- openwebmath/0-1/shard.00003.mds.zstd +3 -0
- openwebmath/0-1/shard.00004.mds.zstd +3 -0
- openwebmath/0-1/shard.00005.mds.zstd +3 -0
- openwebmath/0-1/shard.00006.mds.zstd +3 -0
- openwebmath/0-1/shard.00007.mds.zstd +3 -0
- openwebmath/0-1/shard.00008.mds.zstd +3 -0
- openwebmath/0-1/shard.00009.mds.zstd +3 -0
- openwebmath/0-1/shard.00010.mds.zstd +3 -0
- openwebmath/0-1/shard.00011.mds.zstd +3 -0
- openwebmath/0-1/shard.00012.mds.zstd +3 -0
- openwebmath/0-1/shard.00013.mds.zstd +3 -0
- openwebmath/0-1/shard.00014.mds.zstd +3 -0
- openwebmath/0-1/shard.00015.mds.zstd +3 -0
- openwebmath/0-1/shard.00016.mds.zstd +3 -0
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- openwebmath/0-1/shard.00025.mds.zstd +3 -0
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- openwebmath/0-1/shard.00033.mds.zstd +3 -0
- openwebmath/0-1/shard.00035.mds.zstd +3 -0
.gitattributes
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openwebmath/0-7/shard.00024.mds.zstd filter=lfs diff=lfs merge=lfs -text
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| 725 |
+
openwebmath/0-15/shard.00001.mds.zstd filter=lfs diff=lfs merge=lfs -text
|
| 726 |
+
openwebmath/0-7/shard.00026.mds.zstd filter=lfs diff=lfs merge=lfs -text
|
| 727 |
+
openwebmath/0-7/shard.00000.mds.zstd filter=lfs diff=lfs merge=lfs -text
|
| 728 |
+
openwebmath/0-7/shard.00020.mds.zstd filter=lfs diff=lfs merge=lfs -text
|
| 729 |
+
openwebmath/0-15/shard.00025.mds.zstd filter=lfs diff=lfs merge=lfs -text
|
| 730 |
+
openwebmath/0-13/shard.00036.mds.zstd filter=lfs diff=lfs merge=lfs -text
|
| 731 |
+
openwebmath/0-13/shard.00027.mds.zstd filter=lfs diff=lfs merge=lfs -text
|
| 732 |
+
openwebmath/0-7/shard.00013.mds.zstd filter=lfs diff=lfs merge=lfs -text
|
| 733 |
+
openwebmath/0-15/shard.00031.mds.zstd filter=lfs diff=lfs merge=lfs -text
|
| 734 |
+
openwebmath/0-15/shard.00020.mds.zstd filter=lfs diff=lfs merge=lfs -text
|
| 735 |
+
openwebmath/0-15/shard.00015.mds.zstd filter=lfs diff=lfs merge=lfs -text
|
| 736 |
+
openwebmath/0-7/shard.00025.mds.zstd filter=lfs diff=lfs merge=lfs -text
|
| 737 |
+
openwebmath/0-7/shard.00005.mds.zstd filter=lfs diff=lfs merge=lfs -text
|
| 738 |
+
openwebmath/0-7/shard.00027.mds.zstd filter=lfs diff=lfs merge=lfs -text
|
| 739 |
+
openwebmath/0-13/shard.00034.mds.zstd filter=lfs diff=lfs merge=lfs -text
|
| 740 |
+
openwebmath/0-15/shard.00013.mds.zstd filter=lfs diff=lfs merge=lfs -text
|
| 741 |
+
openwebmath/0-7/shard.00003.mds.zstd filter=lfs diff=lfs merge=lfs -text
|
arxiv/0-0/index.json
ADDED
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@@ -0,0 +1 @@
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| 1 |
+
{"shards": [{"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00000.mds", "bytes": 66917285, "hashes": {}}, "samples": 1150, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00000.mds.zstd", "bytes": 18863455, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00001.mds", "bytes": 67085896, "hashes": {}}, "samples": 1199, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00001.mds.zstd", "bytes": 19212348, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00002.mds", "bytes": 67088710, "hashes": {}}, "samples": 1127, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00002.mds.zstd", "bytes": 18829081, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00003.mds", "bytes": 67074386, "hashes": {}}, "samples": 1219, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00003.mds.zstd", "bytes": 19006549, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00004.mds", "bytes": 67093522, "hashes": {}}, "samples": 1187, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00004.mds.zstd", "bytes": 19307543, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00005.mds", "bytes": 67095336, "hashes": {}}, "samples": 1140, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00005.mds.zstd", "bytes": 18633028, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00006.mds", "bytes": 67074079, "hashes": {}}, "samples": 1159, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00006.mds.zstd", "bytes": 19128248, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00007.mds", "bytes": 67000185, "hashes": {}}, "samples": 1142, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00007.mds.zstd", "bytes": 19069119, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00008.mds", "bytes": 67095853, "hashes": {}}, "samples": 1136, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00008.mds.zstd", "bytes": 19132352, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00009.mds", "bytes": 67066265, "hashes": {}}, "samples": 1085, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00009.mds.zstd", "bytes": 18517303, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00010.mds", "bytes": 67088619, "hashes": {}}, "samples": 1165, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00010.mds.zstd", "bytes": 19228501, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00011.mds", "bytes": 67025797, "hashes": {}}, "samples": 1145, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00011.mds.zstd", "bytes": 18848973, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00012.mds", "bytes": 67081767, "hashes": {}}, "samples": 1185, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00012.mds.zstd", "bytes": 19225478, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00013.mds", "bytes": 67106213, "hashes": {}}, "samples": 1201, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00013.mds.zstd", "bytes": 19049310, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00014.mds", "bytes": 67015070, "hashes": {}}, "samples": 1125, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00014.mds.zstd", "bytes": 19280655, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00015.mds", "bytes": 67073561, "hashes": {}}, "samples": 1221, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00015.mds.zstd", "bytes": 19270709, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00016.mds", "bytes": 67108457, "hashes": {}}, "samples": 1213, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00016.mds.zstd", "bytes": 19114974, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00017.mds", "bytes": 67032255, "hashes": {}}, "samples": 1093, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00017.mds.zstd", "bytes": 18841700, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00018.mds", "bytes": 67086699, "hashes": {}}, "samples": 1118, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00018.mds.zstd", "bytes": 19170343, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00019.mds", "bytes": 67053989, "hashes": {}}, "samples": 1163, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00019.mds.zstd", "bytes": 19307212, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00020.mds", "bytes": 67053005, "hashes": {}}, "samples": 1200, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00020.mds.zstd", "bytes": 19225079, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00021.mds", "bytes": 67106181, "hashes": {}}, "samples": 1239, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00021.mds.zstd", "bytes": 19295955, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00022.mds", "bytes": 67101675, "hashes": {}}, "samples": 1164, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00022.mds.zstd", "bytes": 19239632, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00023.mds", "bytes": 67086471, "hashes": {}}, "samples": 1188, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00023.mds.zstd", "bytes": 19344414, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00024.mds", "bytes": 67108205, "hashes": {}}, "samples": 1145, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00024.mds.zstd", "bytes": 19151851, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00025.mds", "bytes": 64069800, "hashes": {}}, "samples": 1119, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00025.mds.zstd", "bytes": 18342170, "hashes": {}}}], "version": 2}
|
arxiv/0-0/tokenize_output.log
ADDED
|
@@ -0,0 +1,72 @@
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|
|
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|
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|
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|
|
|
|
|
|
|
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|
|
|
|
|
|
|
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|
|
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|
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|
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|
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|
|
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|
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|
|
|
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|
|
|
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|
|
|
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|
|
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|
| 1 |
+
Because `predownload` was not specified, it will default to 8*batch_size if batch_size is not None, otherwise 64. Prior to Streaming v0.7.0, `predownload` defaulted to max(batch_size, 256 * batch_size // num_canonical_nodes).
|
| 2 |
+
Special tokens have been added in the vocabulary, make sure the associated word embeddings are fine-tuned or trained.
|
| 3 |
+
Using local dataset /home/oweller/bert24-data/data/ProLong_text/arxiv/0-0...
|
| 4 |
+
Using tokenizer model bclavie/olmo_bert_template...
|
| 5 |
+
Using 1 processes for tokenization, with 1000 items per process.
|
| 6 |
+
|
| 7 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 81, in sample_dataset_from_config
|
| 8 |
+
results = pool.map(process_func, chunks)
|
| 9 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 367, in map
|
| 10 |
+
return self._map_async(func, iterable, mapstar, chunksize).get()
|
| 11 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 768, in get
|
| 12 |
+
self.wait(timeout)
|
| 13 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 765, in wait
|
| 14 |
+
self._event.wait(timeout)
|
| 15 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/threading.py", line 607, in wait
|
| 16 |
+
signaled = self._cond.wait(timeout)
|
| 17 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/threading.py", line 320, in wait
|
| 18 |
+
waiter.acquire()
|
| 19 |
+
KeyboardInterrupt
|
| 20 |
+
|
| 21 |
+
During handling of the above exception, another exception occurred:
|
| 22 |
+
|
| 23 |
+
Traceback (most recent call last):
|
| 24 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 64, in sample_dataset_from_config
|
| 25 |
+
with mp.Pool(num_processes) as pool:
|
| 26 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 739, in __exit__
|
| 27 |
+
self.terminate()
|
| 28 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 657, in terminate
|
| 29 |
+
self._terminate()
|
| 30 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/util.py", line 224, in __call__
|
| 31 |
+
res = self._callback(*self._args, **self._kwargs)
|
| 32 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 732, in _terminate_pool
|
| 33 |
+
p.join()
|
| 34 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/process.py", line 149, in join
|
| 35 |
+
res = self._popen.wait(timeout)
|
| 36 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 43, in wait
|
| 37 |
+
return self.poll(os.WNOHANG if timeout == 0.0 else 0)
|
| 38 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 27, in poll
|
| 39 |
+
pid, sts = os.waitpid(self.pid, flag)
|
| 40 |
+
KeyboardInterrupt
|
| 41 |
+
|
| 42 |
+
During handling of the above exception, another exception occurred:
|
| 43 |
+
|
| 44 |
+
Traceback (most recent call last):
|
| 45 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 108, in <module>
|
| 46 |
+
sample_dataset_from_config(args)
|
| 47 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 63, in sample_dataset_from_config
|
| 48 |
+
with MDSWriter(out=output_dir, columns=MDS_COLS_PRE_TOKENIZED, compression='zstd') as mds_writer:
|
| 49 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 354, in __exit__
|
| 50 |
+
self.finish()
|
| 51 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 298, in finish
|
| 52 |
+
self.flush_shard()
|
| 53 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 429, in flush_shard
|
| 54 |
+
raw_data_info, zip_data_info = self._process_file(raw_data, raw_data_basename,
|
| 55 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 212, in _process_file
|
| 56 |
+
zip_data = compress(self.compression, raw_data)
|
| 57 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/compression.py", line 240, in compress
|
| 58 |
+
return obj.compress(data)
|
| 59 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/compression.py", line 153, in compress
|
| 60 |
+
return zstd.compress(data, self.level)
|
| 61 |
+
KeyboardInterrupt
|
| 62 |
+
Exception ignored in atexit callback: <function _exit_function at 0x7f72cfceb6d0>
|
| 63 |
+
Traceback (most recent call last):
|
| 64 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/util.py", line 357, in _exit_function
|
| 65 |
+
p.join()
|
| 66 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/process.py", line 149, in join
|
| 67 |
+
res = self._popen.wait(timeout)
|
| 68 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 43, in wait
|
| 69 |
+
return self.poll(os.WNOHANG if timeout == 0.0 else 0)
|
| 70 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 27, in poll
|
| 71 |
+
pid, sts = os.waitpid(self.pid, flag)
|
| 72 |
+
KeyboardInterrupt:
|
arxiv/0-6/index.json
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{"shards": [{"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00000.mds", "bytes": 66884582, "hashes": {}}, "samples": 1171, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00000.mds.zstd", "bytes": 19131832, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00001.mds", "bytes": 67078786, "hashes": {}}, "samples": 1153, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00001.mds.zstd", "bytes": 19097172, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00002.mds", "bytes": 67072367, "hashes": {}}, "samples": 1137, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00002.mds.zstd", "bytes": 18836077, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00003.mds", "bytes": 67055157, "hashes": {}}, "samples": 1156, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00003.mds.zstd", "bytes": 19150122, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00004.mds", "bytes": 67103301, "hashes": {}}, "samples": 1143, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00004.mds.zstd", "bytes": 19052257, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00005.mds", "bytes": 67102494, "hashes": {}}, "samples": 1167, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00005.mds.zstd", "bytes": 19271204, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00006.mds", "bytes": 66982177, "hashes": {}}, "samples": 1087, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00006.mds.zstd", "bytes": 18953266, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00007.mds", "bytes": 67052831, "hashes": {}}, "samples": 1169, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00007.mds.zstd", "bytes": 19225357, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00008.mds", "bytes": 67086153, "hashes": {}}, "samples": 1179, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00008.mds.zstd", "bytes": 19088293, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00009.mds", "bytes": 67048649, "hashes": {}}, "samples": 1193, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00009.mds.zstd", "bytes": 19422585, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00010.mds", "bytes": 67095529, "hashes": {}}, "samples": 1184, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00010.mds.zstd", "bytes": 19338176, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00011.mds", "bytes": 67046191, "hashes": {}}, "samples": 1129, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00011.mds.zstd", "bytes": 18898985, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00012.mds", "bytes": 67074611, "hashes": {}}, "samples": 1133, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00012.mds.zstd", "bytes": 18960078, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00013.mds", "bytes": 67026505, "hashes": {}}, "samples": 1134, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00013.mds.zstd", "bytes": 18971449, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00014.mds", "bytes": 67055749, "hashes": {}}, "samples": 1202, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00014.mds.zstd", "bytes": 19181789, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00015.mds", "bytes": 67087404, "hashes": {}}, "samples": 1123, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00015.mds.zstd", "bytes": 19138951, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00016.mds", "bytes": 67052886, "hashes": {}}, "samples": 1156, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00016.mds.zstd", "bytes": 19365917, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00017.mds", "bytes": 66985707, "hashes": {}}, "samples": 1175, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00017.mds.zstd", "bytes": 19001691, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00018.mds", "bytes": 67092042, "hashes": {}}, "samples": 1197, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00018.mds.zstd", "bytes": 19056959, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00019.mds", "bytes": 67072222, "hashes": {}}, "samples": 1143, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00019.mds.zstd", "bytes": 19147986, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00020.mds", "bytes": 67095621, "hashes": {}}, "samples": 1217, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00020.mds.zstd", "bytes": 19232948, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00021.mds", "bytes": 67084434, "hashes": {}}, "samples": 1154, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00021.mds.zstd", "bytes": 19346774, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00022.mds", "bytes": 67090784, "hashes": {}}, "samples": 1182, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00022.mds.zstd", "bytes": 19075386, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00023.mds", "bytes": 67087451, "hashes": {}}, "samples": 1179, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00023.mds.zstd", "bytes": 19125015, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00024.mds", "bytes": 67089943, "hashes": {}}, "samples": 1187, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00024.mds.zstd", "bytes": 19108821, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00025.mds", "bytes": 67108109, "hashes": {}}, "samples": 1170, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00025.mds.zstd", "bytes": 18669090, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00026.mds", "bytes": 3227054, "hashes": {}}, "samples": 52, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00026.mds.zstd", "bytes": 942264, "hashes": {}}}], "version": 2}
|
arxiv/0-6/tokenize_output.log
ADDED
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@@ -0,0 +1,58 @@
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| 1 |
+
Because `predownload` was not specified, it will default to 8*batch_size if batch_size is not None, otherwise 64. Prior to Streaming v0.7.0, `predownload` defaulted to max(batch_size, 256 * batch_size // num_canonical_nodes).
|
| 2 |
+
Special tokens have been added in the vocabulary, make sure the associated word embeddings are fine-tuned or trained.
|
| 3 |
+
Using local dataset /home/oweller/bert24-data/data/ProLong_text/arxiv/0-6...
|
| 4 |
+
Using tokenizer model bclavie/olmo_bert_template...
|
| 5 |
+
Using 1 processes for tokenization, with 1000 items per process.
|
| 6 |
+
|
| 7 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 81, in sample_dataset_from_config
|
| 8 |
+
results = pool.map(process_func, chunks)
|
| 9 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 367, in map
|
| 10 |
+
return self._map_async(func, iterable, mapstar, chunksize).get()
|
| 11 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 768, in get
|
| 12 |
+
self.wait(timeout)
|
| 13 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 765, in wait
|
| 14 |
+
self._event.wait(timeout)
|
| 15 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/threading.py", line 607, in wait
|
| 16 |
+
signaled = self._cond.wait(timeout)
|
| 17 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/threading.py", line 320, in wait
|
| 18 |
+
waiter.acquire()
|
| 19 |
+
KeyboardInterrupt
|
| 20 |
+
|
| 21 |
+
During handling of the above exception, another exception occurred:
|
| 22 |
+
|
| 23 |
+
Traceback (most recent call last):
|
| 24 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 64, in sample_dataset_from_config
|
| 25 |
+
with mp.Pool(num_processes) as pool:
|
| 26 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 739, in __exit__
|
| 27 |
+
self.terminate()
|
| 28 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 657, in terminate
|
| 29 |
+
self._terminate()
|
| 30 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/util.py", line 224, in __call__
|
| 31 |
+
res = self._callback(*self._args, **self._kwargs)
|
| 32 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 732, in _terminate_pool
|
| 33 |
+
p.join()
|
| 34 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/process.py", line 149, in join
|
| 35 |
+
res = self._popen.wait(timeout)
|
| 36 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 43, in wait
|
| 37 |
+
return self.poll(os.WNOHANG if timeout == 0.0 else 0)
|
| 38 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 27, in poll
|
| 39 |
+
pid, sts = os.waitpid(self.pid, flag)
|
| 40 |
+
KeyboardInterrupt
|
| 41 |
+
|
| 42 |
+
During handling of the above exception, another exception occurred:
|
| 43 |
+
|
| 44 |
+
Traceback (most recent call last):
|
| 45 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 108, in <module>
|
| 46 |
+
sample_dataset_from_config(args)
|
| 47 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 63, in sample_dataset_from_config
|
| 48 |
+
with MDSWriter(out=output_dir, columns=MDS_COLS_PRE_TOKENIZED, compression='zstd') as mds_writer:
|
| 49 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 354, in __exit__
|
| 50 |
+
self.finish()
|
| 51 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 298, in finish
|
| 52 |
+
self.flush_shard()
|
| 53 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 428, in flush_shard
|
| 54 |
+
raw_data = self.encode_joint_shard()
|
| 55 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/mds/writer.py", line 143, in encode_joint_shard
|
| 56 |
+
sample_data = b''.join(self.new_samples)
|
| 57 |
+
KeyboardInterrupt
|
| 58 |
+
|
arxiv/1-5/index.json
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{"shards": [{"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00000.mds", "bytes": 67087651, "hashes": {}}, "samples": 1186, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00000.mds.zstd", "bytes": 19151081, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00001.mds", "bytes": 67077559, "hashes": {}}, "samples": 1166, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00001.mds.zstd", "bytes": 19365864, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00002.mds", "bytes": 67065960, "hashes": {}}, "samples": 1227, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00002.mds.zstd", "bytes": 19226233, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00003.mds", "bytes": 67104232, "hashes": {}}, "samples": 1169, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00003.mds.zstd", "bytes": 19192505, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00004.mds", "bytes": 67014915, "hashes": {}}, "samples": 1162, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00004.mds.zstd", "bytes": 19175975, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00005.mds", "bytes": 67097348, "hashes": {}}, "samples": 1128, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00005.mds.zstd", "bytes": 19042221, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00006.mds", "bytes": 67009235, "hashes": {}}, "samples": 1181, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00006.mds.zstd", "bytes": 18993144, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00007.mds", "bytes": 67048119, "hashes": {}}, "samples": 1193, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00007.mds.zstd", "bytes": 19304716, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00008.mds", "bytes": 67074832, "hashes": {}}, "samples": 1144, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00008.mds.zstd", "bytes": 19106991, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00009.mds", "bytes": 66991718, "hashes": {}}, "samples": 1184, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00009.mds.zstd", "bytes": 19055039, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00010.mds", "bytes": 66943079, 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null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00013.mds", "bytes": 67044080, "hashes": {}}, "samples": 1133, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00013.mds.zstd", "bytes": 18849066, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00014.mds", "bytes": 67076753, "hashes": {}}, "samples": 1136, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00014.mds.zstd", "bytes": 18864672, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00015.mds", "bytes": 67092992, "hashes": {}}, "samples": 1159, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00015.mds.zstd", "bytes": 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"hashes": {}}, "samples": 1199, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00018.mds.zstd", "bytes": 19283589, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00019.mds", "bytes": 67084247, "hashes": {}}, "samples": 1223, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00019.mds.zstd", "bytes": 19038213, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00020.mds", "bytes": 67107191, "hashes": {}}, "samples": 1119, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00020.mds.zstd", "bytes": 18553545, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00021.mds", "bytes": 67094432, "hashes": {}}, "samples": 1169, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00021.mds.zstd", "bytes": 19164709, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00022.mds", "bytes": 67086841, "hashes": {}}, "samples": 1098, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00022.mds.zstd", "bytes": 18971875, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00023.mds", "bytes": 67076301, "hashes": {}}, "samples": 1206, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00023.mds.zstd", "bytes": 19437840, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00024.mds", "bytes": 67007949, "hashes": {}}, "samples": 1208, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00024.mds.zstd", "bytes": 19329664, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00025.mds", "bytes": 67063599, "hashes": {}}, "samples": 1208, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00025.mds.zstd", "bytes": 19221634, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00026.mds", "bytes": 9684996, "hashes": {}}, "samples": 187, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00026.mds.zstd", "bytes": 2860962, "hashes": {}}}], "version": 2}
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arxiv/1-5/tokenize_output.log
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Because `predownload` was not specified, it will default to 8*batch_size if batch_size is not None, otherwise 64. Prior to Streaming v0.7.0, `predownload` defaulted to max(batch_size, 256 * batch_size // num_canonical_nodes).
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Using local dataset /home/oweller/bert24-data/data/ProLong_text/arxiv/1-5...
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Traceback (most recent call last):
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File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 108, in <module>
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sample_dataset_from_config(args)
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File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 46, in sample_dataset_from_config
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dataset = StreamingDataset(local=args.dataset, shuffle=False, split=None, batch_size=1, keep_zip=False)
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File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/dataset.py", line 526, in __init__
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self._shm_prefix_int, self._locals_shm = get_shm_prefix(streams_local, streams_remote,
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File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/shared/prefix.py", line 192, in get_shm_prefix
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| 11 |
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shm = SharedMemory(name, True, len(data))
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| 12 |
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File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/shared/memory.py", line 41, in __init__
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shm = BuiltinSharedMemory(name, create, size)
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File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/shared_memory.py", line 104, in __init__
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self._fd = _posixshmem.shm_open(
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FileExistsError: [Errno 17] File exists: '/000043_locals'
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arxiv/2-9/index.json
ADDED
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{"shards": [{"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00000.mds", "bytes": 67087408, "hashes": {}}, "samples": 1103, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00000.mds.zstd", "bytes": 18847157, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00001.mds", "bytes": 67085113, "hashes": {}}, "samples": 1173, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00001.mds.zstd", "bytes": 19303463, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00002.mds", "bytes": 56113591, "hashes": {}}, "samples": 956, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00002.mds.zstd", "bytes": 16025892, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00003.mds", "bytes": 66730580, "hashes": {}}, "samples": 866, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00003.mds.zstd", "bytes": 14958063, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00004.mds", "bytes": 67007048, "hashes": {}}, "samples": 1177, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00004.mds.zstd", "bytes": 19081208, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], 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arxiv/2-9/tokenize_output.log
ADDED
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| 1 |
+
Because `predownload` was not specified, it will default to 8*batch_size if batch_size is not None, otherwise 64. Prior to Streaming v0.7.0, `predownload` defaulted to max(batch_size, 256 * batch_size // num_canonical_nodes).
|
| 2 |
+
Special tokens have been added in the vocabulary, make sure the associated word embeddings are fine-tuned or trained.
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| 3 |
+
Using local dataset /home/oweller/bert24-data/data/ProLong_text/arxiv/2-9...
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| 4 |
+
Using tokenizer model bclavie/olmo_bert_template...
|
| 5 |
+
Using 1 processes for tokenization, with 1000 items per process.
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| 6 |
+
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| 7 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 81, in sample_dataset_from_config
|
| 8 |
+
results = pool.map(process_func, chunks)
|
| 9 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 367, in map
|
| 10 |
+
return self._map_async(func, iterable, mapstar, chunksize).get()
|
| 11 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 768, in get
|
| 12 |
+
self.wait(timeout)
|
| 13 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 765, in wait
|
| 14 |
+
self._event.wait(timeout)
|
| 15 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/threading.py", line 607, in wait
|
| 16 |
+
signaled = self._cond.wait(timeout)
|
| 17 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/threading.py", line 320, in wait
|
| 18 |
+
waiter.acquire()
|
| 19 |
+
KeyboardInterrupt
|
| 20 |
+
|
| 21 |
+
During handling of the above exception, another exception occurred:
|
| 22 |
+
|
| 23 |
+
Traceback (most recent call last):
|
| 24 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 64, in sample_dataset_from_config
|
| 25 |
+
with mp.Pool(num_processes) as pool:
|
| 26 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 739, in __exit__
|
| 27 |
+
self.terminate()
|
| 28 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 657, in terminate
|
| 29 |
+
self._terminate()
|
| 30 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/util.py", line 224, in __call__
|
| 31 |
+
res = self._callback(*self._args, **self._kwargs)
|
| 32 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 732, in _terminate_pool
|
| 33 |
+
p.join()
|
| 34 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/process.py", line 149, in join
|
| 35 |
+
res = self._popen.wait(timeout)
|
| 36 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 43, in wait
|
| 37 |
+
return self.poll(os.WNOHANG if timeout == 0.0 else 0)
|
| 38 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 27, in poll
|
| 39 |
+
pid, sts = os.waitpid(self.pid, flag)
|
| 40 |
+
KeyboardInterrupt
|
| 41 |
+
|
| 42 |
+
During handling of the above exception, another exception occurred:
|
| 43 |
+
|
| 44 |
+
Traceback (most recent call last):
|
| 45 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 108, in <module>
|
| 46 |
+
sample_dataset_from_config(args)
|
| 47 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 63, in sample_dataset_from_config
|
| 48 |
+
with MDSWriter(out=output_dir, columns=MDS_COLS_PRE_TOKENIZED, compression='zstd') as mds_writer:
|
| 49 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 354, in __exit__
|
| 50 |
+
self.finish()
|
| 51 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 298, in finish
|
| 52 |
+
self.flush_shard()
|
| 53 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 428, in flush_shard
|
| 54 |
+
raw_data = self.encode_joint_shard()
|
| 55 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/mds/writer.py", line 143, in encode_joint_shard
|
| 56 |
+
sample_data = b''.join(self.new_samples)
|
| 57 |
+
KeyboardInterrupt
|
| 58 |
+
|
arxiv/4-1-tokenized/index.json
ADDED
|
@@ -0,0 +1 @@
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| 1 |
+
{"shards": [{"column_encodings": ["str", "str", "ndarray:uint16", "int"], "column_names": ["domain", "id", "input_ids", "len"], "column_sizes": [null, null, null, 8], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00000.mds", "bytes": 67098806, "hashes": {}}, "samples": 1839, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00000.mds.zstd", "bytes": 29487585, "hashes": {}}}, {"column_encodings": ["str", "str", "ndarray:uint16", "int"], "column_names": ["domain", "id", "input_ids", "len"], "column_sizes": [null, null, null, 8], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00001.mds", "bytes": 67097856, "hashes": {}}, "samples": 1890, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00001.mds.zstd", "bytes": 29697451, "hashes": {}}}, {"column_encodings": ["str", "str", "ndarray:uint16", "int"], "column_names": ["domain", "id", "input_ids", "len"], "column_sizes": [null, null, null, 8], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00002.mds", "bytes": 67089622, "hashes": {}}, "samples": 1870, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00002.mds.zstd", "bytes": 29776049, "hashes": {}}}, {"column_encodings": ["str", "str", "ndarray:uint16", "int"], "column_names": ["domain", "id", "input_ids", "len"], "column_sizes": [null, null, null, 8], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00003.mds", "bytes": 67054462, "hashes": {}}, "samples": 1846, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00003.mds.zstd", "bytes": 29580653, "hashes": {}}}, {"column_encodings": ["str", "str", "ndarray:uint16", "int"], "column_names": ["domain", "id", "input_ids", "len"], "column_sizes": [null, null, null, 8], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00004.mds", "bytes": 67094334, "hashes": {}}, "samples": 1793, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00004.mds.zstd", "bytes": 29064964, "hashes": {}}}, {"column_encodings": ["str", "str", "ndarray:uint16", "int"], "column_names": ["domain", "id", "input_ids", "len"], "column_sizes": [null, null, null, 8], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00005.mds", "bytes": 67102093, "hashes": {}}, "samples": 1861, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00005.mds.zstd", "bytes": 29491347, "hashes": {}}}, {"column_encodings": ["str", "str", "ndarray:uint16", "int"], "column_names": ["domain", "id", "input_ids", "len"], "column_sizes": [null, null, null, 8], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00006.mds", "bytes": 67091953, "hashes": {}}, "samples": 1824, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00006.mds.zstd", "bytes": 29290226, "hashes": {}}}, {"column_encodings": ["str", "str", "ndarray:uint16", "int"], "column_names": ["domain", "id", "input_ids", "len"], "column_sizes": [null, null, null, 8], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00007.mds", "bytes": 2670931, "hashes": {}}, "samples": 77, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00007.mds.zstd", "bytes": 1141754, "hashes": {}}}], "version": 2}
|
arxiv/4-3/index.json
ADDED
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@@ -0,0 +1 @@
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|
| 1 |
+
{"shards": [{"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00000.mds", "bytes": 67084423, "hashes": {}}, "samples": 1174, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00000.mds.zstd", "bytes": 19158916, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00001.mds", "bytes": 67010058, "hashes": {}}, "samples": 1213, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00001.mds.zstd", "bytes": 19272832, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00002.mds", "bytes": 67018241, "hashes": {}}, "samples": 1187, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00002.mds.zstd", "bytes": 19338918, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00003.mds", "bytes": 67081237, "hashes": {}}, "samples": 1158, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00003.mds.zstd", "bytes": 19157639, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00004.mds", "bytes": 67094174, "hashes": {}}, "samples": 1156, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00004.mds.zstd", "bytes": 19127392, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00005.mds", "bytes": 67083243, "hashes": {}}, "samples": 1142, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00005.mds.zstd", "bytes": 18945453, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00006.mds", "bytes": 67004293, "hashes": {}}, "samples": 1149, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00006.mds.zstd", "bytes": 18809117, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00007.mds", "bytes": 67059324, "hashes": {}}, "samples": 1163, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00007.mds.zstd", "bytes": 18959740, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00008.mds", "bytes": 67104281, "hashes": {}}, "samples": 1194, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00008.mds.zstd", "bytes": 19213875, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00009.mds", "bytes": 67101622, "hashes": {}}, "samples": 1173, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00009.mds.zstd", "bytes": 19133012, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00010.mds", "bytes": 67104897, "hashes": {}}, "samples": 1133, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00010.mds.zstd", "bytes": 18604105, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00011.mds", "bytes": 67097962, "hashes": {}}, "samples": 1158, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00011.mds.zstd", "bytes": 19224851, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00012.mds", "bytes": 66854033, "hashes": {}}, "samples": 1194, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00012.mds.zstd", "bytes": 19120155, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00013.mds", "bytes": 67083427, "hashes": {}}, "samples": 1129, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00013.mds.zstd", "bytes": 18935813, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00014.mds", "bytes": 67098704, "hashes": {}}, "samples": 1132, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00014.mds.zstd", "bytes": 18712074, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00015.mds", "bytes": 67057168, "hashes": {}}, "samples": 1175, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00015.mds.zstd", "bytes": 19136600, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00016.mds", "bytes": 67077532, "hashes": {}}, "samples": 1182, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00016.mds.zstd", "bytes": 19099609, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00017.mds", "bytes": 67107483, "hashes": {}}, "samples": 1134, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00017.mds.zstd", "bytes": 18981886, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00018.mds", "bytes": 66875825, "hashes": {}}, "samples": 1159, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00018.mds.zstd", "bytes": 19063062, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00019.mds", "bytes": 67075473, "hashes": {}}, "samples": 1179, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00019.mds.zstd", "bytes": 19166322, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00020.mds", "bytes": 67083383, "hashes": {}}, "samples": 1141, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00020.mds.zstd", "bytes": 19070664, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00021.mds", "bytes": 66915495, "hashes": {}}, "samples": 1128, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00021.mds.zstd", "bytes": 18983038, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00022.mds", "bytes": 67026061, "hashes": {}}, "samples": 1175, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00022.mds.zstd", "bytes": 19145193, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00023.mds", "bytes": 67088668, "hashes": {}}, "samples": 1173, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00023.mds.zstd", "bytes": 19010320, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00024.mds", "bytes": 67049453, "hashes": {}}, "samples": 1177, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00024.mds.zstd", "bytes": 18917167, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00025.mds", "bytes": 65265038, "hashes": {}}, "samples": 1162, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00025.mds.zstd", "bytes": 18772001, "hashes": {}}}], "version": 2}
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arxiv/4-3/tokenize_output.log
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|
| 1 |
+
Because `predownload` was not specified, it will default to 8*batch_size if batch_size is not None, otherwise 64. Prior to Streaming v0.7.0, `predownload` defaulted to max(batch_size, 256 * batch_size // num_canonical_nodes).
|
| 2 |
+
Special tokens have been added in the vocabulary, make sure the associated word embeddings are fine-tuned or trained.
|
| 3 |
+
Using local dataset /home/oweller/bert24-data/data/ProLong_text/arxiv/4-3...
|
| 4 |
+
Using tokenizer model bclavie/olmo_bert_template...
|
| 5 |
+
Using 1 processes for tokenization, with 1000 items per process.
|
| 6 |
+
|
| 7 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 81, in sample_dataset_from_config
|
| 8 |
+
results = pool.map(process_func, chunks)
|
| 9 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 367, in map
|
| 10 |
+
return self._map_async(func, iterable, mapstar, chunksize).get()
|
| 11 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 768, in get
|
| 12 |
+
self.wait(timeout)
|
| 13 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 765, in wait
|
| 14 |
+
self._event.wait(timeout)
|
| 15 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/threading.py", line 607, in wait
|
| 16 |
+
signaled = self._cond.wait(timeout)
|
| 17 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/threading.py", line 320, in wait
|
| 18 |
+
waiter.acquire()
|
| 19 |
+
KeyboardInterrupt
|
| 20 |
+
|
| 21 |
+
During handling of the above exception, another exception occurred:
|
| 22 |
+
|
| 23 |
+
Traceback (most recent call last):
|
| 24 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 64, in sample_dataset_from_config
|
| 25 |
+
with mp.Pool(num_processes) as pool:
|
| 26 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 739, in __exit__
|
| 27 |
+
self.terminate()
|
| 28 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 657, in terminate
|
| 29 |
+
self._terminate()
|
| 30 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/util.py", line 224, in __call__
|
| 31 |
+
res = self._callback(*self._args, **self._kwargs)
|
| 32 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 732, in _terminate_pool
|
| 33 |
+
p.join()
|
| 34 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/process.py", line 149, in join
|
| 35 |
+
res = self._popen.wait(timeout)
|
| 36 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 43, in wait
|
| 37 |
+
return self.poll(os.WNOHANG if timeout == 0.0 else 0)
|
| 38 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 27, in poll
|
| 39 |
+
pid, sts = os.waitpid(self.pid, flag)
|
| 40 |
+
KeyboardInterrupt
|
| 41 |
+
|
| 42 |
+
During handling of the above exception, another exception occurred:
|
| 43 |
+
|
| 44 |
+
Traceback (most recent call last):
|
| 45 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 108, in <module>
|
| 46 |
+
sample_dataset_from_config(args)
|
| 47 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 63, in sample_dataset_from_config
|
| 48 |
+
with MDSWriter(out=output_dir, columns=MDS_COLS_PRE_TOKENIZED, compression='zstd') as mds_writer:
|
| 49 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 354, in __exit__
|
| 50 |
+
self.finish()
|
| 51 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 300, in finish
|
| 52 |
+
self._write_index()
|
| 53 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 289, in _write_index
|
| 54 |
+
sleep(1)
|
| 55 |
+
KeyboardInterrupt
|
| 56 |
+
Exception ignored in atexit callback: <function _exit_function at 0x7fe197ceb6d0>
|
| 57 |
+
Traceback (most recent call last):
|
| 58 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/util.py", line 357, in _exit_function
|
| 59 |
+
p.join()
|
| 60 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/process.py", line 149, in join
|
| 61 |
+
res = self._popen.wait(timeout)
|
| 62 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 43, in wait
|
| 63 |
+
return self.poll(os.WNOHANG if timeout == 0.0 else 0)
|
| 64 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 27, in poll
|
| 65 |
+
pid, sts = os.waitpid(self.pid, flag)
|
| 66 |
+
KeyboardInterrupt:
|
arxiv/4-9/tokenize_output.log
ADDED
|
@@ -0,0 +1,64 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
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|
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|
|
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|
|
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|
|
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|
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|
|
|
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|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
Because `predownload` was not specified, it will default to 8*batch_size if batch_size is not None, otherwise 64. Prior to Streaming v0.7.0, `predownload` defaulted to max(batch_size, 256 * batch_size // num_canonical_nodes).
|
| 2 |
+
Special tokens have been added in the vocabulary, make sure the associated word embeddings are fine-tuned or trained.
|
| 3 |
+
Using local dataset /home/oweller/bert24-data/data/ProLong_text/arxiv/4-9...
|
| 4 |
+
Using tokenizer model bclavie/olmo_bert_template...
|
| 5 |
+
Using 1 processes for tokenization, with 1000 items per process.
|
| 6 |
+
|
| 7 |
+
|
| 8 |
+
During handling of the above exception, another exception occurred:
|
| 9 |
+
|
| 10 |
+
Traceback (most recent call last):
|
| 11 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 64, in sample_dataset_from_config
|
| 12 |
+
with mp.Pool(num_processes) as pool:
|
| 13 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 739, in __exit__
|
| 14 |
+
self.terminate()
|
| 15 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 657, in terminate
|
| 16 |
+
self._terminate()
|
| 17 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/util.py", line 224, in __call__
|
| 18 |
+
res = self._callback(*self._args, **self._kwargs)
|
| 19 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 732, in _terminate_pool
|
| 20 |
+
p.join()
|
| 21 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/process.py", line 149, in join
|
| 22 |
+
res = self._popen.wait(timeout)
|
| 23 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 43, in wait
|
| 24 |
+
return self.poll(os.WNOHANG if timeout == 0.0 else 0)
|
| 25 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 27, in poll
|
| 26 |
+
pid, sts = os.waitpid(self.pid, flag)
|
| 27 |
+
KeyboardInterrupt
|
| 28 |
+
|
| 29 |
+
During handling of the above exception, another exception occurred:
|
| 30 |
+
|
| 31 |
+
Traceback (most recent call last):
|
| 32 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 108, in <module>
|
| 33 |
+
sample_dataset_from_config(args)
|
| 34 |
+
File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 63, in sample_dataset_from_config
|
| 35 |
+
with MDSWriter(out=output_dir, columns=MDS_COLS_PRE_TOKENIZED, compression='zstd') as mds_writer:
|
| 36 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 354, in __exit__
|
| 37 |
+
self.finish()
|
| 38 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 298, in finish
|
| 39 |
+
self.flush_shard()
|
| 40 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 429, in flush_shard
|
| 41 |
+
raw_data_info, zip_data_info = self._process_file(raw_data, raw_data_basename,
|
| 42 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 212, in _process_file
|
| 43 |
+
zip_data = compress(self.compression, raw_data)
|
| 44 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/compression.py", line 240, in compress
|
| 45 |
+
return obj.compress(data)
|
| 46 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/compression.py", line 153, in compress
|
| 47 |
+
return zstd.compress(data, self.level)
|
| 48 |
+
KeyboardInterrupt
|
| 49 |
+
Exception ignored in atexit callback: <bound method finalize._exitfunc of <class 'weakref.finalize'>>
|
| 50 |
+
Traceback (most recent call last):
|
| 51 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/weakref.py", line 667, in _exitfunc
|
| 52 |
+
f()
|
| 53 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/weakref.py", line 591, in __call__
|
| 54 |
+
return info.func(*info.args, **(info.kwargs or {}))
|
| 55 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/urllib3/connectionpool.py", line 1180, in _close_pool_connections
|
| 56 |
+
conn.close()
|
| 57 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/urllib3/connection.py", line 275, in close
|
| 58 |
+
super().close()
|
| 59 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/http/client.py", line 961, in close
|
| 60 |
+
sock.close() # close it manually... there may be other refs
|
| 61 |
+
File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/socket.py", line 498, in close
|
| 62 |
+
def close(self):
|
| 63 |
+
KeyboardInterrupt:
|
| 64 |
+
|
arxiv/5-4/index.json
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{"shards": [{"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00000.mds", "bytes": 66983324, "hashes": {}}, "samples": 1166, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00000.mds.zstd", "bytes": 19019899, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00001.mds", "bytes": 67061277, "hashes": {}}, "samples": 1135, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00001.mds.zstd", "bytes": 19060089, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00002.mds", "bytes": 67095498, "hashes": {}}, "samples": 1162, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00002.mds.zstd", "bytes": 19125237, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00003.mds", "bytes": 67030621, "hashes": {}}, "samples": 1181, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00003.mds.zstd", "bytes": 19149076, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00004.mds", "bytes": 67104132, "hashes": {}}, "samples": 1157, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00004.mds.zstd", "bytes": 19097560, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00005.mds", "bytes": 66689923, "hashes": {}}, "samples": 1178, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00005.mds.zstd", "bytes": 18790024, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00006.mds", "bytes": 66980930, "hashes": {}}, "samples": 1163, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00006.mds.zstd", "bytes": 18986632, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00007.mds", "bytes": 67036469, "hashes": {}}, "samples": 1189, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00007.mds.zstd", "bytes": 18999491, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00008.mds", "bytes": 67101145, "hashes": {}}, "samples": 1153, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00008.mds.zstd", "bytes": 19153825, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00009.mds", "bytes": 67050117, "hashes": {}}, "samples": 1135, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00009.mds.zstd", "bytes": 18778591, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00010.mds", "bytes": 67079727, "hashes": {}}, "samples": 1161, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00010.mds.zstd", "bytes": 19447039, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00011.mds", "bytes": 66998727, "hashes": {}}, "samples": 1226, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00011.mds.zstd", "bytes": 19173751, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00012.mds", "bytes": 67104552, "hashes": {}}, "samples": 1167, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00012.mds.zstd", "bytes": 19097724, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00013.mds", "bytes": 66913430, "hashes": {}}, "samples": 1178, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00013.mds.zstd", "bytes": 19037340, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00014.mds", "bytes": 67069718, "hashes": {}}, "samples": 1132, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00014.mds.zstd", "bytes": 18772454, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00015.mds", "bytes": 67102509, "hashes": {}}, "samples": 1175, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00015.mds.zstd", "bytes": 19325224, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00016.mds", "bytes": 66979385, "hashes": {}}, "samples": 1222, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00016.mds.zstd", "bytes": 19234729, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00017.mds", "bytes": 67060368, "hashes": {}}, "samples": 1176, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00017.mds.zstd", "bytes": 19034758, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00018.mds", "bytes": 67087468, 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arxiv/8-7/index.json
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size 22552638
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|
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version https://git-lfs.github.com/spec/v1
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openwebmath/0-1/shard.00033.mds.zstd
ADDED
|
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version https://git-lfs.github.com/spec/v1
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openwebmath/0-1/shard.00035.mds.zstd
ADDED
|
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version https://git-lfs.github.com/spec/v1
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