HDR Imageomics Institute org
edited 17 days ago

Removing the mask images which were initially used for getting individual beetles.
Now we have manually annotated individual beetle images

mridulk changed pull request status to open
egrace479 changed pull request title from Remove Mask Images to Reorganize Repo
HDR Imageomics Institute org
edited about 18 hours ago

This PR reorganizes the repository to be more straightforward:

  • Removes mid-process images from Separate_segmented_train_test_splits_80_20/: group_images_masks/ and separate_segmented_beetle_images/.
  • Adds Separate_segmented_train_test_splits_80_20/README.md explaining this subset and linking to a commit where both the intermediate step folders existed. Include full citation (with DOI) for that version of the dataset (including on SST repo which uses this).
  • Renames beetle_images_resized/ to group_images_resized/ so relationship is clearer.
    • Metadata appropriately adjusted to keep dataset viewer functional. Specifically, the file_name column in beetle_images_resized/metadata.csv needs to be updated from beetle_images_resized/<img-filename> to group_images_resized/<img-filename.
  • Updates the Dataset Structure section of the README to explain remaining components ("subsets") of this dataset.
  • Removes individual_metadata.csv (check for pointers elsewhere to maintain record if needed).
HDR Imageomics Institute org

We also need to update the citation (will be done on this branch and we'll back-to-back merge #25, then this one).

HDR Imageomics Institute org
Ready to merge
This branch is ready to get merged automatically.

Sign up or log in to comment