diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom/3_prime_UTR_variant/GPN_final.LogisticRegression.chrom.subset_from_all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom/3_prime_UTR_variant/GPN_final.LogisticRegression.chrom.subset_from_all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..663d249007d8f99747edca8a4e7f7b0b8d5a244a
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom/3_prime_UTR_variant/GPN_final.LogisticRegression.chrom.subset_from_all.csv
@@ -0,0 +1,8 @@
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom/3_prime_UTR_variant/GPN_final_LLR.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom/3_prime_UTR_variant/GPN_final_LLR.minus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..9fda2d595c7e89be51fa1b1e28544e15f4ed2b0e
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom/3_prime_UTR_variant/GPN_final_LLR.minus.score.csv
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom/5_prime_UTR_variant/GPN_final.LogisticRegression.chrom.subset_from_all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom/5_prime_UTR_variant/GPN_final.LogisticRegression.chrom.subset_from_all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..e37581ae2bd061c721c1cc0e0614147e21e789cb
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom/5_prime_UTR_variant/GPN_final.LogisticRegression.chrom.subset_from_all.csv
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom/5_prime_UTR_variant/GPN_final_LLR.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom/5_prime_UTR_variant/GPN_final_LLR.minus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..c8a2e3ae3a70b0be52c2c77dc1984af2caaffe96
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom/5_prime_UTR_variant/GPN_final_LLR.minus.score.csv
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom/all/Borzoi_L2_L2.plus.all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom/all/Borzoi_L2_L2.plus.all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..a2b0a161ffd033851feec6350b06cdca805f6094
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom/all/Borzoi_L2_L2.plus.all.csv
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom/all/CADD+GPN-MSA+Borzoi.LogisticRegression.chrom.csv b/mendelian_traits_matched_9/AUPRC_by_chrom/all/CADD+GPN-MSA+Borzoi.LogisticRegression.chrom.csv
new file mode 100644
index 0000000000000000000000000000000000000000..1d5f3227caebdd77cc2274745b2052612959ba11
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom/all/CADD+GPN-MSA+Borzoi.LogisticRegression.chrom.csv
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new file mode 100644
index 0000000000000000000000000000000000000000..dd728f511aceab8cf040e4ba0ffd115183501960
--- /dev/null
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom/all/Caduceus_InnerProduct.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom/all/Caduceus_InnerProduct.minus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..18a1538ba6c09a2e8133caf963a629d80976a3f5
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom/all/Caduceus_InnerProduct.minus.score.csv
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom/all/Enformer_L2_L2.plus.all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom/all/Enformer_L2_L2.plus.all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..ab106038e3e3fe90826008ae3deec46284980823
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom/all/Enformer_L2_L2.plus.all.csv
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom/all/GPN-MSA+Borzoi.LogisticRegression.chrom.csv b/mendelian_traits_matched_9/AUPRC_by_chrom/all/GPN-MSA+Borzoi.LogisticRegression.chrom.csv
new file mode 100644
index 0000000000000000000000000000000000000000..f2d147fa22f0558d305e8f5a41fc9124fdfc218b
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom/all/GPN-MSA+Borzoi.LogisticRegression.chrom.csv
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom/all/GPN_final_Embeddings.plus.cosine_distance.csv b/mendelian_traits_matched_9/AUPRC_by_chrom/all/GPN_final_Embeddings.plus.cosine_distance.csv
new file mode 100644
index 0000000000000000000000000000000000000000..27d352e66fc90413960b5d5a08f182d0810e1f8f
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom/all/GPN_final_Embeddings.plus.cosine_distance.csv
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom/all/GPN_final_EuclideanDistance.plus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom/all/GPN_final_EuclideanDistance.plus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..d31c288850829823a223f712eb879e9e90cea97a
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom/all/GPN_final_EuclideanDistance.plus.score.csv
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom/all/NucleotideTransformer_Embeddings.plus.cosine_distance.csv b/mendelian_traits_matched_9/AUPRC_by_chrom/all/NucleotideTransformer_Embeddings.plus.cosine_distance.csv
new file mode 100644
index 0000000000000000000000000000000000000000..5910069988a96ecc58912c75737ca86de3d005b7
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom/all/NucleotideTransformer_Embeddings.plus.cosine_distance.csv
@@ -0,0 +1,20 @@
+chrom,n,Model,AUPRC
+1,210,NucleotideTransformer_Embeddings.plus.cosine_distance,0.11957111405091744
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom/non_coding_transcript_exon_variant/GPN_final_LLR.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom/non_coding_transcript_exon_variant/GPN_final_LLR.minus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..a34dd2e359acac1a5d3e104cb18069bd8f093ba2
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom/non_coding_transcript_exon_variant/GPN_final_LLR.minus.score.csv
@@ -0,0 +1,9 @@
+chrom,n,Model,AUPRC
+2,150,GPN_final_LLR.minus.score,0.12009523359276793
+3,250,GPN_final_LLR.minus.score,0.1462924533734105
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom/nonexonic_AND_proximal/GPN_final_LLR.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom/nonexonic_AND_proximal/GPN_final_LLR.minus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..c7b4f0e21ffec99759afb67a58ca2e747e52d771
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom/nonexonic_AND_proximal/GPN_final_LLR.minus.score.csv
@@ -0,0 +1,16 @@
+chrom,n,Model,AUPRC
+1,70,GPN_final_LLR.minus.score,0.32663947248501335
+10,30,GPN_final_LLR.minus.score,0.14215686274509803
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/3_prime_UTR_variant/GPN_final.LogisticRegression.chrom.subset_from_all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/3_prime_UTR_variant/GPN_final.LogisticRegression.chrom.subset_from_all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..4a8725733431b99d9abe3eed86d314a4a3eb2f50
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/3_prime_UTR_variant/GPN_final.LogisticRegression.chrom.subset_from_all.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN_final.LogisticRegression.chrom.subset_from_all,AUPRC,0.23389321928581175,0.034673117024992504
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/3_prime_UTR_variant/GPN_final_LLR.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/3_prime_UTR_variant/GPN_final_LLR.minus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..0ff3a857d6a9bdf36717a3c76fe165f69a7588bd
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/3_prime_UTR_variant/GPN_final_LLR.minus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN_final_LLR.minus.score,AUPRC,0.21837515829843088,0.04843572997630987
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/Borzoi.LogisticRegression.chrom.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/Borzoi.LogisticRegression.chrom.csv
new file mode 100644
index 0000000000000000000000000000000000000000..544539e1688a39f53d2bf141c0c8299093fbc366
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/Borzoi.LogisticRegression.chrom.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+Borzoi.LogisticRegression.chrom,AUPRC,0.49298026682825974,0.03387962392290682
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/Borzoi_L2_L2.plus.all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/Borzoi_L2_L2.plus.all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..abf26592a4ba712727f684cb68ffea5468295707
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/Borzoi_L2_L2.plus.all.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+Borzoi_L2_L2.plus.all,AUPRC,0.4355656136169956,0.051597004283321764
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/CADD+Borzoi.LogisticRegression.chrom.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/CADD+Borzoi.LogisticRegression.chrom.csv
new file mode 100644
index 0000000000000000000000000000000000000000..9a4193f87f62db64f68b57b424fad84d9048c3e3
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/CADD+Borzoi.LogisticRegression.chrom.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+CADD+Borzoi.LogisticRegression.chrom,AUPRC,0.7567548643334822,0.02800090306412582
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/CADD+GPN-MSA+Borzoi.LogisticRegression.chrom.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/CADD+GPN-MSA+Borzoi.LogisticRegression.chrom.csv
new file mode 100644
index 0000000000000000000000000000000000000000..41386d5bcd3b9e852a12c9d1e412cf24443494e2
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/CADD+GPN-MSA+Borzoi.LogisticRegression.chrom.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+CADD+GPN-MSA+Borzoi.LogisticRegression.chrom,AUPRC,0.739661869792865,0.03341660529784681
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/CADD.LogisticRegression.chrom.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/CADD.LogisticRegression.chrom.csv
new file mode 100644
index 0000000000000000000000000000000000000000..4297b6b24934a4310667a3344b775e4a9f2cd939
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/CADD.LogisticRegression.chrom.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+CADD.LogisticRegression.chrom,AUPRC,0.8746598261796723,0.03053334830628915
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/CADD.plus.RawScore.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/CADD.plus.RawScore.csv
new file mode 100644
index 0000000000000000000000000000000000000000..5660cedfe2db88853b42f0b0d7ec2765ed12f66f
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/CADD.plus.RawScore.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+CADD.plus.RawScore,AUPRC,0.7121847808331817,0.038447877158699226
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/Caduceus_Embeddings.minus.inner_product.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/Caduceus_Embeddings.minus.inner_product.csv
new file mode 100644
index 0000000000000000000000000000000000000000..47a56d50dee7a650fdf9ef446beb14083eb13b12
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/Caduceus_Embeddings.minus.inner_product.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+Caduceus_Embeddings.minus.inner_product,AUPRC,0.131076433348165,0.016254752195469967
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/Caduceus_Embeddings.plus.cosine_distance.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/Caduceus_Embeddings.plus.cosine_distance.csv
new file mode 100644
index 0000000000000000000000000000000000000000..4836ac9099246317576c906c720ef14afbf8d07b
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/Caduceus_Embeddings.plus.cosine_distance.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+Caduceus_Embeddings.plus.cosine_distance,AUPRC,0.13455900406076435,0.010093335540829028
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/Enformer.LogisticRegression.chrom.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/Enformer.LogisticRegression.chrom.csv
new file mode 100644
index 0000000000000000000000000000000000000000..93340d6f7c8ccd2fe1e9b4ddc371328003519fc0
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/Enformer.LogisticRegression.chrom.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+Enformer.LogisticRegression.chrom,AUPRC,0.4457897978393392,0.037976767408547156
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA+Borzoi.LogisticRegression.chrom.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA+Borzoi.LogisticRegression.chrom.csv
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index 0000000000000000000000000000000000000000..d6a1bab7df31d77f8a8ead71b72a128b167b9fe7
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA+Borzoi.LogisticRegression.chrom.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN-MSA+Borzoi.LogisticRegression.chrom,AUPRC,0.7219609968170422,0.040220160541453186
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_Embeddings.minus.inner_product.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_Embeddings.minus.inner_product.csv
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index 0000000000000000000000000000000000000000..5cb14278a66a131724f3abddd2f5bff83a917700
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+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_Embeddings.minus.inner_product.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_Embeddings.plus.cosine_distance.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_Embeddings.plus.cosine_distance.csv
new file mode 100644
index 0000000000000000000000000000000000000000..59a6af76f78d5dd0d484609203886ec7bf35153b
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_Embeddings.plus.cosine_distance.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_Embeddings.plus.euclidean_distance.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_Embeddings.plus.euclidean_distance.csv
new file mode 100644
index 0000000000000000000000000000000000000000..045bd3354e9ac9b926cfed73a62ff60418bd478b
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_Embeddings.plus.euclidean_distance.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN-MSA_Embeddings.plus.euclidean_distance,AUPRC,0.2069238590320193,0.020884292254464948
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_InnerProduct.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_InnerProduct.minus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..2561aeb1857b671a54309e652db031aa6cb6cb4e
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_InnerProduct.minus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_LLR.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_LLR.minus.score.csv
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index 0000000000000000000000000000000000000000..e75610a43f0e51f799264a6c2f1b3e0bdc45d55b
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_LLR.minus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
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diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_absLLR.plus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_absLLR.plus.score.csv
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index 0000000000000000000000000000000000000000..60c8243730a23a0ed34377adf08c8c8c4f86056b
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN-MSA_absLLR.plus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN-MSA_absLLR.plus.score,AUPRC,0.654222678718318,0.044972926205583436
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN_final.LogisticRegression.chrom.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN_final.LogisticRegression.chrom.csv
new file mode 100644
index 0000000000000000000000000000000000000000..2acb3db3299903503c0f1ae74d2ecb9d0f246ba1
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN_final.LogisticRegression.chrom.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN_final.LogisticRegression.chrom,AUPRC,0.35284494920222204,0.0583212250339244
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN_final_Embeddings.plus.cosine_distance.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN_final_Embeddings.plus.cosine_distance.csv
new file mode 100644
index 0000000000000000000000000000000000000000..bfe67ac2d5ff55f8ec93019f943c63b04fd34b2f
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN_final_Embeddings.plus.cosine_distance.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN_final_Embeddings.plus.cosine_distance,AUPRC,0.26339060037943085,0.03821887033915233
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN_final_InnerProduct.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN_final_InnerProduct.minus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..6af652e35aeb309c74284f2316f50240076447cc
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN_final_InnerProduct.minus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN_final_InnerProduct.minus.score,AUPRC,0.16922307246758078,0.047496210894077816
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN_final_LLR.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN_final_LLR.minus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..aeb11e542becc7d686f4baba2b6dd80e3e7de0a1
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN_final_LLR.minus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN_final_LLR.minus.score,AUPRC,0.4216763931462392,0.0696638713065584
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN_final_absLLR.plus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN_final_absLLR.plus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..4616af2d190e8b90bc0dc180865b94d8a703abb7
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/GPN_final_absLLR.plus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN_final_absLLR.plus.score,AUPRC,0.3788158878953516,0.06863303003742684
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA.LogisticRegression.chrom.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA.LogisticRegression.chrom.csv
new file mode 100644
index 0000000000000000000000000000000000000000..5485d51cafbed7939ef560f942f2b7854774cc18
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA.LogisticRegression.chrom.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+HyenaDNA.LogisticRegression.chrom,AUPRC,0.14564822190132384,0.013889472455416422
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA_Embeddings.minus.inner_product.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA_Embeddings.minus.inner_product.csv
new file mode 100644
index 0000000000000000000000000000000000000000..753e440a2ec90dcf72248bbd174d3f3115591fe1
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA_Embeddings.minus.inner_product.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+HyenaDNA_Embeddings.minus.inner_product,AUPRC,0.16481698661406813,0.031015495478498096
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA_Embeddings.plus.cosine_distance.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA_Embeddings.plus.cosine_distance.csv
new file mode 100644
index 0000000000000000000000000000000000000000..a31555f7aef10d04a92f54dfba3ea9eb3511e317
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA_Embeddings.plus.cosine_distance.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+HyenaDNA_Embeddings.plus.cosine_distance,AUPRC,0.116403099062234,0.013540904520628455
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA_Embeddings.plus.euclidean_distance.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA_Embeddings.plus.euclidean_distance.csv
new file mode 100644
index 0000000000000000000000000000000000000000..e4bd0743f0fc3053d99c57e7dfac8d78142c8dc9
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA_Embeddings.plus.euclidean_distance.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+HyenaDNA_Embeddings.plus.euclidean_distance,AUPRC,0.11689260373905239,0.014477215207015169
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA_InnerProduct.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA_InnerProduct.minus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..2635e7cb374a36844474ceb27af3e69b8a11f0e7
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA_InnerProduct.minus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+HyenaDNA_InnerProduct.minus.score,AUPRC,0.164816865284936,0.03101554926698257
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA_LLR.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA_LLR.minus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..de91c246118ee654243a5bafc628e8892fb21f46
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/HyenaDNA_LLR.minus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+HyenaDNA_LLR.minus.score,AUPRC,0.1152052872349429,0.006084103442958281
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/NucleotideTransformer_Embeddings.minus.inner_product.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/NucleotideTransformer_Embeddings.minus.inner_product.csv
new file mode 100644
index 0000000000000000000000000000000000000000..7ea33f131ced826487ef545bfe5e354555f002d7
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/NucleotideTransformer_Embeddings.minus.inner_product.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+NucleotideTransformer_Embeddings.minus.inner_product,AUPRC,0.18491586645094094,0.03892242955424739
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/NucleotideTransformer_Embeddings.plus.cosine_distance.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/NucleotideTransformer_Embeddings.plus.cosine_distance.csv
new file mode 100644
index 0000000000000000000000000000000000000000..f06279eafa8261ebecf15e07ee6afe0553e39c45
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/NucleotideTransformer_Embeddings.plus.cosine_distance.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+NucleotideTransformer_Embeddings.plus.cosine_distance,AUPRC,0.18559760988782165,0.02214462833081281
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/NucleotideTransformer_InnerProduct.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/NucleotideTransformer_InnerProduct.minus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..8db0e830a0e97706b26bfb9cc420cfac642d8ba4
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/NucleotideTransformer_InnerProduct.minus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+NucleotideTransformer_InnerProduct.minus.score,AUPRC,0.18486365621773523,0.03888299929015381
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/NucleotideTransformer_absLLR.plus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/NucleotideTransformer_absLLR.plus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..b9261f9e47449159bb7bcd05d2513258b20ee778
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/all/NucleotideTransformer_absLLR.plus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+NucleotideTransformer_absLLR.plus.score,AUPRC,0.0980640932373892,0.006411086678697549
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Borzoi_L2_L2.plus.all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Borzoi_L2_L2.plus.all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..e733822c44a55dafb25b4469cf03f90c78500c70
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Borzoi_L2_L2.plus.all.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+Borzoi_L2_L2.plus.all,AUPRC,0.42077578278371996,0.056588693438561044
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/CADD.LogisticRegression.chrom.subset_from_all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/CADD.LogisticRegression.chrom.subset_from_all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..3c93c6125cc406041d863b409f5a66af6b1641ab
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/CADD.LogisticRegression.chrom.subset_from_all.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+CADD.LogisticRegression.chrom.subset_from_all,AUPRC,0.8726172101949277,0.03181353647521414
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/CADD.plus.RawScore.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/CADD.plus.RawScore.csv
new file mode 100644
index 0000000000000000000000000000000000000000..d7763ae1f3cf4dd87c19a3db894fa743399caaf5
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/CADD.plus.RawScore.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+CADD.plus.RawScore,AUPRC,0.7123226850054453,0.042753232097228845
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Caduceus.LogisticRegression.chrom.subset_from_all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Caduceus.LogisticRegression.chrom.subset_from_all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..cfeb15f1db892c2e4f2bf8d540b7f0656d9952cd
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Caduceus.LogisticRegression.chrom.subset_from_all.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+Caduceus.LogisticRegression.chrom.subset_from_all,AUPRC,0.23918098977627947,0.06675845773245048
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Caduceus_Embeddings.minus.inner_product.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Caduceus_Embeddings.minus.inner_product.csv
new file mode 100644
index 0000000000000000000000000000000000000000..8bd7cf457b64a829ce4e0932df7d6c7106b1cb2d
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Caduceus_Embeddings.minus.inner_product.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+Caduceus_Embeddings.minus.inner_product,AUPRC,0.13074729844126376,0.016099440628138485
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Caduceus_Embeddings.plus.euclidean_distance.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Caduceus_Embeddings.plus.euclidean_distance.csv
new file mode 100644
index 0000000000000000000000000000000000000000..143f221e436f3f451eb7f4f67086c6df2ade071e
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Caduceus_Embeddings.plus.euclidean_distance.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+Caduceus_Embeddings.plus.euclidean_distance,AUPRC,0.1361289751637989,0.009750224424726445
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Enformer.LogisticRegression.chrom.subset_from_all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Enformer.LogisticRegression.chrom.subset_from_all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..c82375b140927ebecea2169447fccfd9ee548507
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Enformer.LogisticRegression.chrom.subset_from_all.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+Enformer.LogisticRegression.chrom.subset_from_all,AUPRC,0.4305424777186231,0.04066792572231742
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Enformer_L2_L2.plus.all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Enformer_L2_L2.plus.all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..20f6d627692ada50f17d8338676557655cfd51fd
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Enformer_L2_L2.plus.all.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+Enformer_L2_L2.plus.all,AUPRC,0.40955786258228055,0.040058793224660015
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN-MSA.LogisticRegression.chrom.subset_from_all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN-MSA.LogisticRegression.chrom.subset_from_all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..c8b43eaa6f9706be0aef4c8f1d718414ca068ba3
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN-MSA.LogisticRegression.chrom.subset_from_all.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN-MSA.LogisticRegression.chrom.subset_from_all,AUPRC,0.6806927383853418,0.06775517563812701
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN-MSA_LLR.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN-MSA_LLR.minus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..a1723b7e162a06fcc56ad47df885976bb5062248
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN-MSA_LLR.minus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN-MSA_LLR.minus.score,AUPRC,0.6842876460531456,0.04430612535753203
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN-MSA_absLLR.plus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN-MSA_absLLR.plus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..ff1fe6eb021143a321e09f140ec9ba88f7e25c6e
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN-MSA_absLLR.plus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN-MSA_absLLR.plus.score,AUPRC,0.6422699721363312,0.04765407204080914
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN_final.LogisticRegression.chrom.subset_from_all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN_final.LogisticRegression.chrom.subset_from_all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..ef4c10169a9ef4e40b7b4bb3b73b9f9610fe75e1
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN_final.LogisticRegression.chrom.subset_from_all.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN_final.LogisticRegression.chrom.subset_from_all,AUPRC,0.3506468582483456,0.0580855408235829
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN_final_Embeddings.plus.euclidean_distance.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN_final_Embeddings.plus.euclidean_distance.csv
new file mode 100644
index 0000000000000000000000000000000000000000..4064ad022277c5831fdecb0269045fc6f3cdf236
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN_final_Embeddings.plus.euclidean_distance.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN_final_Embeddings.plus.euclidean_distance,AUPRC,0.34368365003565227,0.060189811966072336
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN_final_LLR.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN_final_LLR.minus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..ccbfec4c0103c9c560ed39ca48c2cd8faac0ea20
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN_final_LLR.minus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN_final_LLR.minus.score,AUPRC,0.41766947384789427,0.06945977788631137
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN_final_absLLR.plus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN_final_absLLR.plus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..084645073101fc3adb27480500993f3ad0d983e4
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/GPN_final_absLLR.plus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN_final_absLLR.plus.score,AUPRC,0.3739401158526147,0.06812475940962415
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/HyenaDNA.LogisticRegression.chrom.subset_from_all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/HyenaDNA.LogisticRegression.chrom.subset_from_all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..54643644fd027be3f749e99214122a1a5a26f6f8
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/HyenaDNA.LogisticRegression.chrom.subset_from_all.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+HyenaDNA.LogisticRegression.chrom.subset_from_all,AUPRC,0.15532714145866744,0.014989879163308609
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/HyenaDNA_Embeddings.minus.inner_product.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/HyenaDNA_Embeddings.minus.inner_product.csv
new file mode 100644
index 0000000000000000000000000000000000000000..bd8ead3b6d0bfe55045eaf55b53bfc58449f1c66
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/HyenaDNA_Embeddings.minus.inner_product.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+HyenaDNA_Embeddings.minus.inner_product,AUPRC,0.17327625472199323,0.03361605902352646
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/NucleotideTransformer.LogisticRegression.chrom.subset_from_all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/NucleotideTransformer.LogisticRegression.chrom.subset_from_all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..b9cd00f63e93770db6ead5d936166eefd7b2a812
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/NucleotideTransformer.LogisticRegression.chrom.subset_from_all.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+NucleotideTransformer.LogisticRegression.chrom.subset_from_all,AUPRC,0.16381048528175532,0.02956247324281591
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/NucleotideTransformer_Embeddings.minus.inner_product.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/NucleotideTransformer_Embeddings.minus.inner_product.csv
new file mode 100644
index 0000000000000000000000000000000000000000..6348d3d7e2918125db166605ae76827ff10c7a57
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/NucleotideTransformer_Embeddings.minus.inner_product.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+NucleotideTransformer_Embeddings.minus.inner_product,AUPRC,0.18306592391390428,0.03657009771598856
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Sei.LogisticRegression.chrom.subset_from_all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Sei.LogisticRegression.chrom.subset_from_all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..7f150e94ef2c660db2e94c6da544ac453fe25813
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Sei.LogisticRegression.chrom.subset_from_all.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+Sei.LogisticRegression.chrom.subset_from_all,AUPRC,0.3486366880759646,0.03476711453402477
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Sei.plus.seqclass_max_absdiff.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Sei.plus.seqclass_max_absdiff.csv
new file mode 100644
index 0000000000000000000000000000000000000000..7d3db26bfedc0c4996208d166938b2f79dd49a22
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/no_cadd_overlap/Sei.plus.seqclass_max_absdiff.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+Sei.plus.seqclass_max_absdiff,AUPRC,0.291473144074377,0.02984238993129533
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/non_coding_transcript_exon_variant/GPN_final.LogisticRegression.chrom.subset_from_all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/non_coding_transcript_exon_variant/GPN_final.LogisticRegression.chrom.subset_from_all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..50804b1d19026eda6b12e1ffd411c7b734c14bcf
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/non_coding_transcript_exon_variant/GPN_final.LogisticRegression.chrom.subset_from_all.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN_final.LogisticRegression.chrom.subset_from_all,AUPRC,0.37554914221491964,0.18091281935720127
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/non_coding_transcript_exon_variant/GPN_final_LLR.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/non_coding_transcript_exon_variant/GPN_final_LLR.minus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..aab7e5dcb826247a8fdf69bb46031a556e41a208
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/non_coding_transcript_exon_variant/GPN_final_LLR.minus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN_final_LLR.minus.score,AUPRC,0.19849891904982336,0.08443059958987098
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/nonexonic_AND_distal/GPN_final.LogisticRegression.chrom.subset_from_all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/nonexonic_AND_distal/GPN_final.LogisticRegression.chrom.subset_from_all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..34d4b80490792a7d1505c556145ed3f9db0bc6e3
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/nonexonic_AND_distal/GPN_final.LogisticRegression.chrom.subset_from_all.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN_final.LogisticRegression.chrom.subset_from_all,AUPRC,0.4110732796903307,0.0767095755170222
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/nonexonic_AND_distal/GPN_final_LLR.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/nonexonic_AND_distal/GPN_final_LLR.minus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..3d36458324d77c0356bec4e93ced6df856e14b74
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/nonexonic_AND_distal/GPN_final_LLR.minus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN_final_LLR.minus.score,AUPRC,0.19983274532369025,0.07117947523572436
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/nonexonic_AND_proximal/GPN_final.LogisticRegression.chrom.subset_from_all.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/nonexonic_AND_proximal/GPN_final.LogisticRegression.chrom.subset_from_all.csv
new file mode 100644
index 0000000000000000000000000000000000000000..6ba8452fd6da8f70336dc8720cfafe117fd351b6
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/nonexonic_AND_proximal/GPN_final.LogisticRegression.chrom.subset_from_all.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN_final.LogisticRegression.chrom.subset_from_all,AUPRC,0.4911505504851954,0.08088875764894175
diff --git a/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/nonexonic_AND_proximal/GPN_final_LLR.minus.score.csv b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/nonexonic_AND_proximal/GPN_final_LLR.minus.score.csv
new file mode 100644
index 0000000000000000000000000000000000000000..c065358983ac3d12284fedc86b6094ecbfc8d8e8
--- /dev/null
+++ b/mendelian_traits_matched_9/AUPRC_by_chrom_weighted_average/nonexonic_AND_proximal/GPN_final_LLR.minus.score.csv
@@ -0,0 +1,2 @@
+model,metric,score,se
+GPN_final_LLR.minus.score,AUPRC,0.6050005443505098,0.06988906110110873
diff --git a/mendelian_traits_matched_9/test.parquet b/mendelian_traits_matched_9/test.parquet
new file mode 100644
index 0000000000000000000000000000000000000000..96a7e9a365de284634d6eb8d32678fbf4f99baf4
--- /dev/null
+++ b/mendelian_traits_matched_9/test.parquet
@@ -0,0 +1,3 @@
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